Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919700.1_cds_XP_016468886.1_61479
CDS Infomation

[gene=LOC107791355] [db_xref=GeneID:107791355] [protein=GDSL esterase/lipase At5g03820-like] [protein_id=XP_016468886.1] [location=complement(join(17111..17304,17679..17971,18030..18163,18487..18720,18804..18934,19011..19302))] [gbkey=CDS]
Sequence

ATGAGTTTCTTGAGGGGTCTATTAGGTGGTCTTCTTCTTGCTATGGCATTTTTTGTATCT
GATGGGNGGGGTCTATTAGGTGGTCTTCTTCTTGCTATGGTATTTTTTGTATCTGATGGA
GACCCTTTGGTTCCAGCATTGTGCATCTTTGGTGATTCTGTAGTTGATGTTGGAAATAAT
AACAACTTAAGCACTCTCATCAAGGCAAACTTCCCACCTTATGGAAGAGATTTTGTAACC
CACAGACCCACCGGAAGGTTCTGCAACGGAAAGCTGGCCACAGACTTCACAGCTGAGTAT
CTTGGGTTCACTTCTTACCCACCAGCTTACCTGAGCCGAGAAGCTAGAGGGAAAAGAATT
CTGACTGGCGTCAACTTTGCCTCTGCCTCTTCCGGTTATTATGAGAGGACTGCTAAACTA
TATCGTGCTCTAACGTTGCCACATCAACTAAAATATTACAGGGTGTGGCAAAGGAAAGTA
GTGAATCTGGTCGGGAGGACCAAGGCTAACAACATATTCTCAGGAAGTATACATCTTATA
AGTGCAGGGAGCAGTGACTTTATTCAAAACTACTACATAAATCCACTACTCAACAGAGTC
TACTCACCTGATCAGTTCTCCGATATCCTCATGCAGTCATACTCTACATTCATTCAGAAA
CTTGGGATTGTTTTGGAACACTTGAGCACCACGTGGACTTACCGTGGAAAAAAAGAAAAA
GCTGAACATCAATACACTATCACAACCTTTACTCCTGATACTGAGCCACATCAAGAAAAT
CAGATCAAGATCCAATCCGCATTTAATACAGCAGCGATCTATGGACAGAACCTCTATGGT
TTGGGAGCAAGGAGGATTGGGGTCACAACTCTGCCACCAACTGGTTGTTTGCCAGCAGCC
ATTACTTTGTTCGGTGCAGGAACCAACCACTGTGTTGCAAGACTGAACAAAGATGCAATC
TCTTTCAATAATAAGCTCAACCGGACATCTCAAAATCTAAAGAGCAAGCTTCCTGGCATC
AAGCTCGTTGTCTTCGACATCTATCAGCCTCTCTTTGATCTGATCACAAAACCTGTAGAA
AATGGATTTTTTGAATCAAGGAAGGCTTGTTGTGGGACTGGTATGATAGAAACATCGTTC
CTTTGTAATGCCAGGTCCATTGGAACATGCTCCAATGCTACAAATTATGTCTTCTGGGAT
GGATTTCATCCCTCAGAAACAGCAAATGAGAAATTGGCTCAAAGTCTGTTGGAACAGGGC
TTTGAGCTCATCTCTTAA

Peptide Sequence

PEP ID

XP_016468886.1
PEP Infomation

PREDICTED: GDSL esterase/lipase At5g03820-like [Nicotiana tabacum]
Sequence

MSFLRGLLGGLLLAMAFFVSDGXGLLGGLLLAMVFFVSDGDPLVPALCIFGDSVVDVGNN
NNLSTLIKANFPPYGRDFVTHRPTGRFCNGKLATDFTAEYLGFTSYPPAYLSREARGKRI
LTGVNFASASSGYYERTAKLYRALTLPHQLKYYRVWQRKVVNLVGRTKANNIFSGSIHLI
SAGSSDFIQNYYINPLLNRVYSPDQFSDILMQSYSTFIQKLGIVLEHLSTTWTYRGKKEK
AEHQYTITTFTPDTEPHQENQIKIQSAFNTAAIYGQNLYGLGARRIGVTTLPPTGCLPAA
ITLFGAGTNHCVARLNKDAISFNNKLNRTSQNLKSKLPGIKLVVFDIYQPLFDLITKPVE
NGFFESRKACCGTGMIETSFLCNARSIGTCSNATNYVFWDGFHPSETANEKLAQSLLEQG
FELIS

Transcript Sequence

Gene sequence data has not been registered.